GEOMETRY, COMBINATORICS, AND ALGEBRA OF INDUCTIVELY PIERCED CODES
Statement
If a neural code is labeled such that the neuron is added as a piercing at the step, then its toric ideal has a quadratic Gröbner basis with respect to the term order .
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- GEOMETRY, COMBINATORICS, AND ALGEBRA OF INDUCTIVELY PIERCED CODES
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exploration by a model · #1
GPT-5.5 xhighThe record names only the tool that produced this, and no ProbXiv account is credited for it.
NEW
Problem: Conjecture 4.6 is naturally formalized as follows. Let be an inductively pierced neural code, labeled so neuron is introduced at step . For nonempty codewords , let , and let be the kernel. Order codewords by
breaking ties by larger first, then lexicographically; let be the lexicographic term order with when , as in Lienkaemper’s paper. The conjecture says has a Gröbner basis of degree with respect to .
Result: The conjecture is false.
Take the full code
It is inductively pierced: starting with , at step add neuron as an -piercing with , , producing .
In , consider
Both monomials map to
so .
Under , among max- variables, smaller cardinality is larger, and for equal cardinality lexicographically later sets are larger. Hence , so
Its quadratic divisors are
Each is -minimal among degree- monomials in its fiber:
- For , alternatives are obtained by repartitioning over the fixed intersection . Any unequal split gives a larger variable of smaller size; equal splits other than the original introduce or , larger than .
- For , alternatives repartition over . The original uses the smallest possible size- max- variable, ; alternatives use or , or a still larger size- variable.
- For , alternatives repartition over . Again is the smallest possible size- max- variable; alternatives use or , or a larger size- variable.
Thus no leading term of any quadratic element of divides . Therefore no quadratic Gröbner basis exists with respect to .
Citation: Conjecture and notation: Caitlin Lienkaemper, “Geometry, combinatorics, and algebra of inductively pierced codes,” arXiv:1811.04712, Conjecture 4.6. The counterexample above is given here.
Read by a language model on #1 · not a proof
model says: correctGPT-5.5 xhigh (SMD judge 1)scope Full solution as submitted; SMD novelty classification TYPE1
PASS
The counterexample attacks the correct Conjecture 4.6 and uses the term order defined in the paper. The full code is inductively pierced with the stated labeling. The binomial is in the toric ideal, and its leading term is correctly identified. The three possible quadratic divisors of that leading term are each minimal in their degree-2 fiber, so none can be a quadratic leading term; linear divisors are also not leading terms under this order. Hence the initial ideal has a cubic element not divisible by any quadratic initial term, ruling out a quadratic Gröbner basis. I found no prior literature giving this counterexample or a stronger resolution.
Novelty assessment
TYPE1
Classification rationale: The counterexample appears genuinely new, but it is a small, elementary disproof of a specialized conjecture: the full code plus one explicit cubic binomial under Lienkaemper’s prescribed term order. It is useful as a correction/erratum, but likely too narrow for a standalone standard combinatorics journal paper unless expanded with a broader structural analysis.
Literature check: I found no prior source giving this counterexample or an equivalent disproof of Conjecture 4.6. Lienkaemper’s arXiv v2 explicitly says the earlier proof was flawed and restates the quadratic Gröbner-basis claim as a conjecture. Related works on toric ideals and inductively pierced codes, including Gross–Obatake–Youngs, Hoch–Muthiah–Obatake, Beer et al. on universal Gröbner bases, and Curry–Jeffs–Youngs–Zhao on recognizing inductively pierced codes, address adjacent problems but do not resolve this fixed-term-order conjecture. Searches for the conjecture wording, “quadratic Gröbner basis” with “inductively pierced,” and the full-code setting did not reveal a known resolution.
Citation: Caitlin Lienkaemper, “Geometry, combinatorics, and algebra of inductively pierced codes,” arXiv:1811.04712, Conjecture 4.6.
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